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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015878105.1_cds_XP_016436665.1_32500
CDS Infomation

[gene=LOC107762790] [db_xref=GeneID:107762790] [protein=homogentisate geranylgeranyltransferase-like] [protein_id=XP_016436665.1] [location=complement(join(487..528,611..715,810..905,2031..2102,2371..2466,2592..2693,3246..3335,3944..4027,4132..4206,4383..4466,4616..4878,5232..5280))] [gbkey=CDS]
Sequence

ATGCTCCATTTACATCCTTGCTCTTGTCAATTTCCATCACTCACAAAAGGACTTGAAGGG
GCATCAGAACAAGTGGAAAATGCTAGGATTATTCATCAAAGGAGATTGTCCTTCCCAAAA
TTTGTGAACTCAATTGACAGGATAAACACAAGGAAGAATACAAGTGACAAAATATTCAAA
AGCCATAATATATCAAAAGGGTATATAAGTGCAGCCTCATCAGGACATTGTGAAATCTCT
TCTAAAGATGGTTTTTGGAAGCAATTGAATGCATTATACCAATTTTCTCGCCCACACACA
ATATTTGGAACAATAATAGGGATCAGTTCAGTTTCTATTCTTCCAACAAAATCGTTAGCA
GATATTTCTCCCACATTTTTTGTGGGATTATTGAAGGCCTTAATTCCTTCTCTTTTAATG
AACGTTTATGTGGTAGGATTAAATCAAATTTTTGATGTGGAAATTGACAAGGTGAACAAA
CCAAATTTGCCACTAGCTTCTGGAGAAATTTCAATGGAACTAGGCATAGCAATAGTTATC
ACCTCCTTAATTGTGAGTTTTGGCATGGGAATTAAGTTTCAATCTCCACCATTGTTAGCT
GCTCTCATTGTTAGCTTTTTTCTTGGCAGTGCTTATTCTATAGAGTTACCTTTACTTAGA
TGGAAAAGAAATGCAGCCTTGGCTGCAATATGCATTATGGTTGTGAGGGCTATCGTTGTT
CAGTTTGCTTTCTTTGCACATATTCAGAAGTATGTGCTCGTTAGGCCTATGCTCTATACA
AGATCTCTGGTATTTGCTGTCACTTTTATGGGTATCTTCACCGCTGTCATTGCACTGTTT
AAGGACATACCTGATGTGGATGGTGATAGAGATTTTGGAATCCAATCTTTCAGTGTGAGG
CTTGGCCAAGAAAGAGTGTTTTGGCTATGTATTAGCTTACTTGTTGCTGCATATGGAGTT
GCTATGGTGATTGGAGCTACTTCTTCTTCCCTTTTCAGCAGGCTTGTCACTGTTTTAGGG
CATTTTTTACTTGCTTGCTTTCTATTATTTCAAGCACAATCGGTCGATATAACAAGTCAA
GTATCAGTTACTTCTTTTTATATGTTAATATGGAAGCTATTCTATGCCGAGTACCTTCCC
ATTCCCTTCTTTCGCTAA

Peptide Sequence

PEP ID

XP_016436665.1
PEP Infomation

PREDICTED: homogentisate geranylgeranyltransferase-like [Nicotiana tabacum]
Sequence

MLHLHPCSCQFPSLTKGLEGASEQVENARIIHQRRLSFPKFVNSIDRINTRKNTSDKIFK
SHNISKGYISAASSGHCEISSKDGFWKQLNALYQFSRPHTIFGTIIGISSVSILPTKSLA
DISPTFFVGLLKALIPSLLMNVYVVGLNQIFDVEIDKVNKPNLPLASGEISMELGIAIVI
TSLIVSFGMGIKFQSPPLLAALIVSFFLGSAYSIELPLLRWKRNAALAAICIMVVRAIVV
QFAFFAHIQKYVLVRPMLYTRSLVFAVTFMGIFTAVIALFKDIPDVDGDRDFGIQSFSVR
LGQERVFWLCISLLVAAYGVAMVIGATSSSLFSRLVTVLGHFLLACFLLFQAQSVDITSQ
VSVTSFYMLIWKLFYAEYLPIPFFR

Transcript Sequence

Gene sequence data has not been registered.